Search results for " Random Forest"
showing 10 items of 13 documents
A Methodology to Derive Global Maps of Leaf Traits Using Remote Sensing and Climate Data
2018
This paper introduces a modular processing chain to derive global high-resolution maps of leaf traits. In particular, we present global maps at 500 m resolution of specific leaf area, leaf dry matter content, leaf nitrogen and phosphorus content per dry mass, and leaf nitrogen/phosphorus ratio. The processing chain exploits machine learning techniques along with optical remote sensing data (MODIS/Landsat) and climate data for gap filling and up-scaling of in-situ measured leaf traits. The chain first uses random forests regression with surrogates to fill gaps in the database (> 45% of missing entries) and maximizes the global representativeness of the trait dataset. Plant species are then a…
Preselection statistics and Random Forest classification identify population informative single nucleotide polymorphisms in cosmopolitan and autochth…
2018
Commercial single nucleotide polymorphism (SNP) arrays have been recently developed for several species and can be used to identify informative markers to differentiate breeds or populations for several downstream applications. To identify the most discriminating genetic markers among thousands of genotyped SNPs, a few statistical approaches have been proposed. In this work, we compared several methods of SNPs preselection (Delta, F st and principal component analyses (PCA)) in addition to Random Forest classifications to analyse SNP data from six dairy cattle breeds, including cosmopolitan (Holstein, Brown and Simmental) and autochthonous Italian breeds raised in two different regions and …
Application of selected methods of black box for modelling the settleability process in wastewater treatment plant
2017
The paper described how the results of measurement s of inflow wastewater temperature in the chamber, a degree of external and internal recirculation in the biological-mechanical wastewater treatment plan t (WWTP) in Cedzyna near Kielce, Poland, were used to make predictions of settleability of activated sludge. Three methods,namely: multivariate adaptive regression splines (MARS), random forests (RF) and modified random forests (RF+ SOM) were employed to compute activated sludge settleability. The results of analysis indicate that modified random forests demonstrate the best predictive abilities.
Biomass Assessment of Agricultural Crops Using Multi-temporal Dual-Polarimetric TerraSAR-X Data
2019
The biomass of three agricultural crops, winter wheat (Triticum aestivum L.), barley (Hordeum vulgare L.), and canola (Brassica napus L.), was studied using multi-temporal dual-polarimetric TerraSAR-X data. The radar backscattering coefficient sigma nought of the two polarization channels HH and VV was extracted from the satellite images. Subsequently, combinations of HH and VV polarizations were calculated (e.g. HH/VV, HH + VV, HH × VV) to establish relationships between SAR data and the fresh and dry biomass of each crop type using multiple stepwise regression. Additionally, the semi-empirical water cloud model (WCM) was used to account for the effect of crop biomass on radar backscatter …
Global Estimation of Biophysical Variables from Google Earth Engine Platform
2018
This paper proposes a processing chain for the derivation of global Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fraction Vegetation Cover (FVC), and Canopy water content (CWC) maps from 15-years of MODIS data exploiting the capabilities of the Google Earth Engine (GEE) cloud platform. The retrieval chain is based on a hybrid method inverting the PROSAIL radiative transfer model (RTM) with Random forests (RF) regression. A major feature of this work is the implementation of a retrieval chain exploiting the GEE capabilities using global and climate data records (CDR) of both MODIS surface reflectance and LAI/FAPAR datasets allowing the global estim…
Modeling Macroalgal Forest Distribution at Mediterranean Scale: Present Status, Drivers of Changes and Insights for Conservation and Management
2020
Macroalgal forests are one of the most productive and valuable marine ecosystems, but yet strongly exposed to fragmentation and loss. Detailed large-scale information on their distribution is largely lacking, hindering conservation initiatives. In this study, a systematic effort to combine spatial data on Cystoseira C. Agardh canopies (Fucales, Phaeophyta) was carried out to develop a Habitat Suitability Model (HSM) at Mediterranean scale, providing critical tools to improve site prioritization for their management, restoration and protection. A georeferenced database on the occurrence of 20 Cystoseira species was produced collecting all the available information from published and grey lit…
Assessment of Classifiers and Remote Sensing Features of Hyperspectral Imagery and Stereo-Photogrammetric Point Clouds for Recognition of Tree Specie…
2018
Recognition of tree species and geospatial information on tree species composition is essential for forest management. In this study, tree species recognition was examined using hyperspectral imagery from visible to near-infrared (VNIR) and short-wave infrared (SWIR) camera sensors in combination with a 3D photogrammetric canopy surface model based on RGB camera stereo-imagery. An arboretum with a diverse selection of 26 tree species from 14 genera was used as a test area. Aerial hyperspectral imagery and high spatial resolution photogrammetric color imagery were acquired from the test area using unmanned aerial vehicle (UAV) borne sensors. Hyperspectral imagery was processed to calibrated …
Growing stock volume from multi-temporal landsat imagery through google earth engine
2019
Growing stock volume (GSV) is one of the most important variables for.forest management and is traditionally- estimated from ground measurements. These measurements are expensive and therefore sparse and hard to maintain in time on a regular basis. Remote sensing data combined with national forest inventories constitute a helpful tool to estimate and map forest attributes. However, most studies on GSV estimation from remote sensing data focus on small forest areas with a single or only a few species. The current study aims to map GSV in peninsular Spain, a rather large and very heterogeneous area. Around 50 000 wooded land plots from the Third Spanish National Forest Inventory (NFI3) were u…
Crop Nitrogen Retrieval Methods for Simulated Sentinel-2 Data Using In-Field Spectrometer Data.
2021
Nitrogen (N) is one of the key nutrients supplied in agricultural production worldwide. Over-fertilization can have negative influences on the field and the regional level (e.g., agro-ecosystems). Remote sensing of the plant N of field crops presents a valuable tool for the monitoring of N flows in agro-ecosystems. Available data for validation of satellite-based remote sensing of N is scarce. Therefore, in this study, field spectrometer measurements were used to simulate data of the Sentinel-2 (S2) satellites developed for vegetation monitoring by the ESA. The prediction performance of normalized ratio indices (NRIs), random forest regression (RFR) and Gaussian processes regression (GPR) f…
Application of SNP reduction approaches and random forest for the identification of population informative markers in cosmopolitan and local cattle b…
2017
In livestock, single nucleotide polymorphism genotyping arrays have been used to differentiate breeds and populations for several downstream applications, including breed allocation of individuals, breeds of origin of crossbred animals, authentication of mono breed products, comparative analyses of selection signatures among several other uses. We already tested a combination of principal component analysis (PCA), used as preselection method, and random forest (RF) used as classification method to assign cosmopolitan Italian breeds with no or very low error rate. In this work, we increased the number of breeds and approaches, to have a more comprehensive view of the strategies available and…